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» Gene Prediction by Pattern Recognition and Homology Search
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MCS
2009
Springer
15 years 7 months ago
True Path Rule Hierarchical Ensembles
Abstract. Hierarchical classification problems gained increasing attention within the machine learning community, and several methods for hierarchically structured taxonomies have...
Giorgio Valentini
102
Voted
CIARP
2009
Springer
15 years 3 months ago
A Brief Index for Proximity Searching
A large number of computer tasks can be modeled as the search for an object near a given query. From multimedia databases to learning algorithms, data mining and pattern recognitio...
Eric Sadit Tellez, Edgar Chávez, Antonio Ca...
BMCBI
2008
126views more  BMCBI 2008»
15 years 15 days ago
c-REDUCE: Incorporating sequence conservation to detect motifs that correlate with expression
Background: Computational methods for characterizing novel transcription factor binding sites search for sequence patterns or "motifs" that appear repeatedly in genomic ...
Katerina Kechris, Hao Li
BIOINFORMATICS
2007
195views more  BIOINFORMATICS 2007»
15 years 15 days ago
Context-dependent clustering for dynamic cellular state modeling of microarray gene expression
Motivation: High-throughput expression profiling allows researchers to study gene activities globally. Genes with similar expression profiles are likely to encode proteins that ma...
Shinsheng Yuan, Ker-Chau Li
133
Voted
BMCBI
2002
109views more  BMCBI 2002»
15 years 6 days ago
Kangaroo - A pattern-matching program for biological sequences
Background: Biologists are often interested in performing a simple database search to identify proteins or genes that contain a well-defined sequence pattern. Many databases do no...
Doron Betel, Christopher W. V. Hogue