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» Gene function prediction using labeled and unlabeled data
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BMCBI
2007
127views more  BMCBI 2007»
14 years 10 months ago
Characterization of protein-interaction networks in tumors
Background: Analyzing differential-gene-expression data in the context of protein-interaction networks (PINs) yields information on the functional cellular status. PINs can be for...
Alexander Platzer, Paul Perco, Arno Lukas, Bernd M...
BMCBI
2005
102views more  BMCBI 2005»
14 years 10 months ago
Genome-wide identification of the regulatory targets of a transcription factor using biochemical characterization and computatio
Background: A major challenge in computational genomics is the development of methodologies that allow accurate genome-wide prediction of the regulatory targets of a transcription...
Emmitt R. Jolly, Chen-Shan Chin, Ira Herskowitz, H...
JMLR
2012
13 years 16 days ago
On Nonparametric Guidance for Learning Autoencoder Representations
Unsupervised discovery of latent representations, in addition to being useful for density modeling, visualisation and exploratory data analysis, is also increasingly important for...
Jasper Snoek, Ryan Prescott Adams, Hugo Larochelle
BMCBI
2011
14 years 1 months ago
Learning sparse models for a dynamic Bayesian network classifier of protein secondary structure
Background: Protein secondary structure prediction provides insight into protein function and is a valuable preliminary step for predicting the 3D structure of a protein. Dynamic ...
Zafer Aydin, Ajit Singh, Jeff Bilmes, William Staf...
TSMC
2010
14 years 4 months ago
Distance Approximating Dimension Reduction of Riemannian Manifolds
We study the problem of projecting high-dimensional tensor data on an unspecified Riemannian manifold onto some lower dimensional subspace1 without much distorting the pairwise geo...
Changyou Chen, Junping Zhang, Rudolf Fleischer