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» Gene-set approach for expression pattern analysis
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BIBE
2004
IEEE
160views Bioinformatics» more  BIBE 2004»
15 years 1 months ago
A Time Series Analysis of Microarray Data
As the capture and analysis of single-time-point microarray expression data becomes routine, investigators are turning to time-series expression data to investigate complex gene r...
Selnur Erdal, Ozgur Ozturk, David L. Armbruster, H...
96
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BMCBI
2006
127views more  BMCBI 2006»
14 years 9 months ago
Using local gene expression similarities to discover regulatory binding site modules
Background: We present an approach designed to identify gene regulation patterns using sequence and expression data collected for Saccharomyces cerevisae. Our main goal is to rela...
Bartek Wilczynski, Torgeir R. Hvidsten, Andriy Kry...
ASE
2011
14 years 1 months ago
Alattin: mining alternative patterns for defect detection
Abstract To improve software quality, static or dynamic defect-detection tools accept programming rules as input and detect their violations in software as defects. As these progra...
Suresh Thummalapenta, Tao Xie
BMCBI
2006
169views more  BMCBI 2006»
14 years 9 months ago
Finding biological process modifications in cancer tissues by mining gene expression correlations
Background: Through the use of DNA microarrays it is now possible to obtain quantitative measurements of the expression of thousands of genes from a biological sample. This techno...
Giacomo Gamberoni, Sergio Storari, Stefano Volinia
BMCBI
2006
142views more  BMCBI 2006»
14 years 9 months ago
Correlated fragile site expression allows the identification of candidate fragile genes involved in immunity and associated with
Background: Common fragile sites (cfs) are specific regions in the human genome that are particularly prone to genomic instability under conditions of replicative stress. Several ...
Angela Re, Davide Corà, Alda Maria Puliti, ...