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ISCI
2008
137views more  ISCI 2008»
15 years 4 months ago
Inference of differential equation models by genetic programming
This paper describes an evolutionary method for identifying a causal model from the observed time series data. We use a system of ordinary differential equations (ODEs) as the cau...
Hitoshi Iba
BIBM
2009
IEEE
151views Bioinformatics» more  BIBM 2009»
15 years 11 months ago
Detection of Gene Orthology Based on Protein-Protein Interaction Networks
Abstract—Ortholog detection methods present a powerful approach for finding genes that participate in similar biological processes across different organisms, extending our unde...
Fadi Towfic, M. Heather West Greenlee, Vasant Hona...
ISBRA
2009
Springer
15 years 11 months ago
Prediction of Contiguous Regions in the Amniote Ancestral Genome
Abstract. We investigate the problem of inferring contiguous ancestral regions (CARs) of the genome of the last common ancestor of all extant amniotes, based on the currently seque...
Aïda Ouangraoua, Frédéric Boyer...
108
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BIBE
2008
IEEE
115views Bioinformatics» more  BIBE 2008»
15 years 11 months ago
The Mouse Resource Browser (MRB) - A near-complete registry of mouse resources
—The Mouse Resource Browser MRB (http://bioit.fleming.gr/mrb) is an easy-to-use database for searching and retrieving mouse resource information. Currently, MRB hosts a list of 2...
Michael Zouberakis, C. Chandras, John M. Hancock, ...
BIBM
2008
IEEE
175views Bioinformatics» more  BIBM 2008»
15 years 11 months ago
Integrative Protein Function Transfer Using Factor Graphs and Heterogeneous Data Sources
We propose a novel approach for predicting protein functions of an organism by coupling sequence homology and PPI data between two (or more) species with multifunctional Gene Onto...
Antonina Mitrofanova, Vladimir Pavlovic, Bud Mishr...