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HPDC
2010
IEEE
15 years 8 months ago
MPIPairwiseStatSig: parallel pairwise statistical significance estimation of local sequence alignment
Sequence comparison is considered as a cornerstone application in bioinformatics, which forms the basis of many other applications. In particular, pairwise sequence alignment is a...
Ankit Agrawal, Sanchit Misra, Daniel Honbo, Alok N...
AAI
2007
132views more  AAI 2007»
15 years 7 months ago
Incremental Extraction of Association Rules in Applicative Domains
In recent years, the KDD process has been advocated to be an iterative and interactive process. It is seldom the case that a user is able to answer immediately with a single query...
Arianna Gallo, Roberto Esposito, Rosa Meo, Marco B...
BMCBI
2010
152views more  BMCBI 2010»
15 years 7 months ago
Apples and oranges: avoiding different priors in Bayesian DNA sequence analysis
Background: One of the challenges of bioinformatics remains the recognition of short signal sequences in genomic DNA such as donor or acceptor splice sites, splicing enhancers or ...
Jens Keilwagen, Jan Grau, Stefan Posch, Ivo Grosse
BMCBI
2010
122views more  BMCBI 2010»
15 years 7 months ago
An overview of the CellML API and its implementation
Background: CellML is an XML based language for representing mathematical models, in a machine-independent form which is suitable for their exchange between different authors, and...
Andrew K. Miller, Justin Marsh, Adam Reeve, Alan G...
BMCBI
2010
92views more  BMCBI 2010»
15 years 7 months ago
HORI: a web server to compute Higher Order Residue Interactions in protein structures
Background: Folding of a protein into its three dimensional structure is influenced by both local and global interactions within a protein. Higher order residue interactions, like...
Pandurangan Sundaramurthy, Khader Shameer, Raashi ...