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» Generating Data Analysis Programs from Statistical Models
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CSB
2005
IEEE
137views Bioinformatics» more  CSB 2005»
15 years 3 months ago
A Learned Comparative Expression Measure for Affymetrix GeneChip DNA Microarrays
Perhaps the most common question that a microarray study can ask is, “Between two given biological conditions, which genes exhibit changed expression levels?” Existing methods...
Will Sheffler, Eli Upfal, John Sedivy, William Sta...
BMCBI
2010
161views more  BMCBI 2010»
14 years 7 months ago
Addressing the Challenge of Defining Valid Proteomic Biomarkers and Classifiers
Background: The purpose of this manuscript is to provide, based on an extensive analysis of a proteomic data set, suggestions for proper statistical analysis for the discovery of ...
Mohammed Dakna, Keith Harris, Alexandros Kalousis,...
ECBS
1999
IEEE
171views Hardware» more  ECBS 1999»
15 years 2 months ago
Metamodeling - Rapid Design and Evolution of Domain-Specific Modeling Environments
Model integrated computing (MIC) is gaining increased attention as an effective and efficient method for developing, maintaining, and evolving large-scale, domain-specific softwar...
Greg Nordstrom, Janos Sztipanovits, Gabor Karsai, ...
ICSM
2005
IEEE
15 years 3 months ago
Context-Free Slicing of UML Class Models
In the work presented here, we introduce a method to automatically generate a subset of a UML class model based on a user-defined criterion. The goal of this work is to allow us to...
Huzefa H. Kagdi, Jonathan I. Maletic, Andrew Sutto...
BMCBI
2006
105views more  BMCBI 2006»
14 years 10 months ago
Integrative investigation of metabolic and transcriptomic data
Background: New analysis methods are being developed to integrate data from transcriptome, proteome, interactome, metabolome, and other investigative approaches. At the same time,...
Pinar Pir, Betül Kirdar, Andrew Hayes, Z. Ils...