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» Graph Transformation in Molecular Biology
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COMPLEXITY
2010
129views more  COMPLEXITY 2010»
14 years 7 months ago
The notion of computation is fundamental to an autonomous neuroscience
The increasing sophistication of the tools and results of cellular and molecular neuroscience would appear to suggest that explanatory force in neuroscience is defined by reductio...
Garrett Neske
ALMOB
2006
89views more  ALMOB 2006»
14 years 9 months ago
On the maximal cliques in c-max-tolerance graphs and their application in clustering molecular sequences
Given a set S of n locally aligned sequences, it is a needed prerequisite to partition it into groups of very similar sequences to facilitate subsequent computations, such as the ...
Katharina Anna Lehmann, Michael Kaufmann, Stephan ...
104
Voted
TVCG
2008
147views more  TVCG 2008»
14 years 9 months ago
Cerebral: Visualizing Multiple Experimental Conditions on a Graph with Biological Context
Systems biologists use interaction graphs to model the behavior of biological systems at the molecular level. In an iterative process, such biologists observe the reactions of livi...
Aaron Barsky, Tamara Munzner, Jennifer L. Gardy, R...
78
Voted
GG
2004
Springer
15 years 2 months ago
Analysis of Metabolic Pathways by Graph Transformation
Biochemical pathways, such as metabolic, regulatory, and signal transduction pathways, constitute complex networks of functional and physical interactions between molecular species...
Francesc Rosselló, Gabriel Valiente
CIBB
2009
14 years 10 months ago
On the Use of Temporal Formal Logic to Model Gene Regulatory Networks
Modelling activities in molecular biology face the difficulty of prediction to link molecular knowledge with cell phenotypes. Even when the interaction graph between molecules is k...
Gilles Bernot, Jean-Paul Comet