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BXML
2003
15 years 6 months ago
Rule-Based Generation of XML Schemas from UML Class Diagrams
We present an approach of how to automatically extract an XML document structure from a conceptual data model that describes the content of the document. We use UML class diagrams ...
Tobias Krumbein, Thomas Kudrass
UAI
2007
15 years 5 months ago
"I Can Name that Bayesian Network in Two Matrixes!"
The traditional approach to building Bayesian networks is to build the graphical structure using a graphical editor and then add probabilities using a separate spreadsheet for eac...
Russell Almond
BIOINFORMATICS
2008
97views more  BIOINFORMATICS 2008»
15 years 4 months ago
An integrated system for studying residue coevolution in proteins
Residue coevolution has recently emerged as an important concept, especially in the context of protein structures. While a multitude of different functions for quantifying it have...
Kevin Y. Yip, Prianka Patel, Philip M. Kim, Donald...
BMCBI
2010
112views more  BMCBI 2010»
15 years 4 months ago
Orientation-dependent backbone-only residue pair scoring functions for fixed backbone protein design
Background: Empirical scoring functions have proven useful in protein structure modeling. Most such scoring functions depend on protein side chain conformations. However, backbone...
Andrew J. Bordner
BMCBI
2010
163views more  BMCBI 2010»
15 years 4 months ago
Integration of open access literature into the RCSB Protein Data Bank using BioLit
Background: Biological data have traditionally been stored and made publicly available through a variety of on-line databases, whereas biological knowledge has traditionally been ...
Andreas Prlic, Marco A. Martinez, Dimitris Dimitro...