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BMCBI
2011
14 years 4 months ago
The PathOlogist: An Automated Tool for Pathway-Centric Analysis
Background: The PathOlogist is a new tool designed to transform large sets of gene expression data into quantitative descriptors of pathway-level behavior. The tool aims to provid...
Sharon I. Greenblum, Sol Efroni, Carl F. Schaefer,...
TKDE
2012
312views Formal Methods» more  TKDE 2012»
13 years 19 hour ago
Efficient Fuzzy Type-Ahead Search in XML Data
—In a traditional keyword-search system over XML data, a user composes a keyword query, submits it to the system, and retrieves relevant answers. In the case where the user has l...
Jianhua Feng, Guoliang Li
RECOMB
2010
Springer
14 years 11 months ago
Algorithms for Detecting Significantly Mutated Pathways in Cancer
Abstract. Recent genome sequencing studies have shown that the somatic mutations that drive cancer development are distributed across a large number of genes. This mutational heter...
Fabio Vandin, Eli Upfal, Benjamin J. Raphael
TCBB
2011
14 years 4 months ago
Data Mining on DNA Sequences of Hepatitis B Virus
: Extraction of meaningful information from large experimental datasets is a key element of bioinformatics research. One of the challenges is to identify genomic markers in Hepatit...
Kwong-Sak Leung, Kin-Hong Lee, Jin Feng Wang, Eddi...
ICDCSW
2002
IEEE
15 years 2 months ago
Taxonomy of Distributed Event-Based Programming Systems
Event-based middleware is currently being applied for application component integration in a range of application domains. As a result, a variety of event services have been propo...
René Meier, Vinny Cahill