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BMCBI
2008
78views more  BMCBI 2008»
14 years 11 months ago
Deducing topology of protein-protein interaction networks from experimentally measured sub-networks
Background: Protein-protein interaction networks are commonly sampled using yeast two hybrid approaches. However, whether topological information reaped from these experimentallym...
Ling Yang, Thomas M. Vondriska, Zhangang Han, W. R...
COR
2008
116views more  COR 2008»
14 years 11 months ago
Supply disruptions with time-dependent parameters
We consider a firm that faces random demand and receives product from a single supplier who faces random supply. The supplier's availability may be affected by events such as...
Andrew M. Ross, Ying Rong, Lawrence V. Snyder
ALMOB
2006
80views more  ALMOB 2006»
14 years 11 months ago
Pattern statistics on Markov chains and sensitivity to parameter estimation
Background: In order to compute pattern statistics in computational biology a Markov model is commonly used to take into account the sequence composition. Usually its parameter mu...
Grégory Nuel
BMCBI
2007
182views more  BMCBI 2007»
14 years 11 months ago
Identifying regulatory targets of cell cycle transcription factors using gene expression and ChIP-chip data
Background: ChIP-chip data, which indicate binding of transcription factors (TFs) to DNA regions in vivo, are widely used to reconstruct transcriptional regulatory networks. Howev...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen
BMCBI
2007
121views more  BMCBI 2007»
14 years 11 months ago
e-Science and biological pathway semantics
Background: The development of e-Science presents a major set of opportunities and challenges for the future progress of biological and life scientific research. Major new tools a...
Joanne S. Luciano, Robert D. Stevens