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ICPP
2006
IEEE
15 years 10 months ago
A Flexible and Dynamic Infrastructure for MPI Tool Interoperability
The MPI standard provides tool builders with an efficient profiling interface, PMPI. Although many tools have successfully used this interface, it has three major drawbacks: a n...
Martin Schulz, Bronis R. de Supinski
IPPS
2006
IEEE
15 years 10 months ago
High-performance computing in remotely sensed hyperspectral imaging: the Pixel Purity Index algorithm as a case study
The incorporation of last-generation sensors to airborne and satellite platforms is currently producing a nearly continual stream of high-dimensional data, and this explosion in t...
Antonio Plaza, David Valencia, Javier Plaza
PPOPP
2006
ACM
15 years 10 months ago
Performance characterization of molecular dynamics techniques for biomolecular simulations
Large-scale simulations and computational modeling using molecular dynamics (MD) continues to make significant impacts in the field of biology. It is well known that simulations...
Sadaf R. Alam, Jeffrey S. Vetter, Pratul K. Agarwa...
PPOPP
2006
ACM
15 years 10 months ago
Exploiting distributed version concurrency in a transactional memory cluster
We investigate a transactional memory runtime system providing scaling and strong consistency for generic C++ and SQL applications on commodity clusters. We introduce a novel page...
Kaloian Manassiev, Madalin Mihailescu, Cristiana A...
DNA
2005
Springer
154views Bioinformatics» more  DNA 2005»
15 years 10 months ago
Design of Autonomous DNA Cellular Automata
Recent experimental progress in DNA lattice construction, DNA robotics, and DNA computing provides the basis for designing DNA cellular computing devices, i.e. autonomous nano-mech...
Peng Yin, Sudheer Sahu, Andrew J. Turberfield, Joh...