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» Implementing peridynamics within a molecular dynamics code
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IPPS
2007
IEEE
15 years 3 months ago
Analysis of a Computational Biology Simulation Technique on Emerging Processing Architectures
1 Multi-paradigm, multi-threaded and multi-core computing devices available today provide several orders of magnitude performance improvement over mainstream microprocessors. These...
Jeremy S. Meredith, Sadaf R. Alam, Jeffrey S. Vett...
BMCBI
2006
155views more  BMCBI 2006»
14 years 9 months ago
CAVER: a new tool to explore routes from protein clefts, pockets and cavities
Background: The main aim of this study was to develop and implement an algorithm for the rapid, accurate and automated identification of paths leading from buried protein clefts, ...
Martin Petrek, Michal Otyepka, Pavel Banás,...
VEE
2012
ACM
239views Virtualization» more  VEE 2012»
13 years 5 months ago
Transparent dynamic instrumentation
Process virtualization provides a virtual execution environment within which an unmodified application can be monitored and controlled while it executes. The provided layer of co...
Derek Bruening, Qin Zhao, Saman P. Amarasinghe
SC
1994
ACM
15 years 1 months ago
Run-time and compile-time support for adaptive irregular problems
In adaptive irregular problems the data arrays are accessed via indirection arrays, and data access patterns change during computation. Implementingsuch problems ondistributed mem...
Shamik D. Sharma, Ravi Ponnusamy, Bongki Moon, Yua...
IEEEARES
2009
IEEE
15 years 4 months ago
Defeating Dynamic Data Kernel Rootkit Attacks via VMM-Based Guest-Transparent Monitoring
—Targeting the operating system kernel, the core of trust in a system, kernel rootkits are able to compromise the entire system, placing it under malicious control, while eluding...
Junghwan Rhee, Ryan Riley, Dongyan Xu, Xuxian Jian...