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BMCBI
2011
14 years 9 months ago
Motif-guided sparse decomposition of gene expression data for regulatory module identification
Background: Genes work coordinately as gene modules or gene networks. Various computational approaches have been proposed to find gene modules based on gene expression data; for e...
Ting Gong, Jianhua Xuan, Li Chen, Rebecca B. Riggi...
ALMOB
2006
106views more  ALMOB 2006»
15 years 2 months ago
Multiple sequence alignment with user-defined anchor points
Background: Automated software tools for multiple alignment often fail to produce biologically meaningful results. In such situations, expert knowledge can help to improve the qua...
Burkhard Morgenstern, Sonja J. Prohaska, Dirk P&ou...
PAMI
2008
166views more  PAMI 2008»
15 years 1 months ago
Coarse-to-Fine Segmentation and Tracking Using Sobolev Active Contours
Recently proposed Sobolev active contours introduced a new paradigm for minimizing energies defined on curves by changing the traditional cost of perturbing a curve and thereby red...
Ganesh Sundaramoorthi, Anthony J. Yezzi, Andrea Me...
CIKM
2009
Springer
15 years 8 months ago
Helping editors choose better seed sets for entity set expansion
Sets of named entities are used heavily at commercial search engines such as Google, Yahoo and Bing. Acquiring sets of entities typically consists of combining semi-supervised exp...
Vishnu Vyas, Patrick Pantel, Eric Crestan
CC
2006
Springer
124views System Software» more  CC 2006»
15 years 5 months ago
Polyhedral Code Generation in the Real World
The polyhedral model is known to be a powerful framework to reason about high level loop transformations. Recent developments in optimizing compilers broke some generally accepted ...
Nicolas Vasilache, Cédric Bastoul, Albert C...