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HPDC
2006
IEEE
15 years 10 months ago
Exploring I/O Strategies for Parallel Sequence-Search Tools with S3aSim
Parallel sequence-search tools are rising in popularity among computational biologists. With the rapid growth of sequence databases, database segmentation is the trend of the futu...
Avery Ching, Wu-chun Feng, Heshan Lin, Xiaosong Ma...
MM
2006
ACM
108views Multimedia» more  MM 2006»
15 years 10 months ago
Video search reranking via information bottleneck principle
We propose a novel and generic video/image reranking algorithm, IB reranking, which reorders results from text-only searches by discovering the salient visual patterns of relevant...
Winston H. Hsu, Lyndon S. Kennedy, Shih-Fu Chang
MSR
2006
ACM
15 years 10 months ago
Using software birthmarks to identify similar classes and major functionalities
Software birthmarks are unique and native characteristics of every software component. Two components having similar birthmarks indicate that they are similar in functionality, st...
Takeshi Kakimoto, Akito Monden, Yasutaka Kamei, Ha...
PLDI
2006
ACM
15 years 10 months ago
Optimizing memory transactions
Atomic blocks allow programmers to delimit sections of code as ‘atomic’, leaving the language’s implementation to enforce atomicity. Existing work has shown how to implement...
Timothy L. Harris, Mark Plesko, Avraham Shinnar, D...
PPOPP
2006
ACM
15 years 10 months ago
Performance characterization of molecular dynamics techniques for biomolecular simulations
Large-scale simulations and computational modeling using molecular dynamics (MD) continues to make significant impacts in the field of biology. It is well known that simulations...
Sadaf R. Alam, Jeffrey S. Vetter, Pratul K. Agarwa...