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GECCO
2005
Springer
100views Optimization» more  GECCO 2005»
15 years 2 months ago
Evolutionary tree genetic programming
We introduce a clustering-based method of subpopulation management in genetic programming (GP) called Evolutionary Tree Genetic Programming (ETGP). The biological motivation behin...
Ján Antolík, William H. Hsu
ALMOB
2006
155views more  ALMOB 2006»
14 years 9 months ago
A phylogenetic generalized hidden Markov model for predicting alternatively spliced exons
Background: An important challenge in eukaryotic gene prediction is accurate identification of alternatively spliced exons. Functional transcripts can go undetected in gene expres...
Jonathan E. Allen, Steven L. Salzberg
IPPS
2003
IEEE
15 years 2 months ago
Phylogenetic Tree Inference on PC Architectures with AxML/PAxML
Inference of phylogenetic trees comprising hundreds or even thousands of organisms based on the maximum likelihood method is computationally extremely expensive. In previous work,...
Alexandros Stamatakis, Thomas Ludwig 0002
UM
2009
Springer
15 years 4 months ago
Adaptive Clustering of Search Results
Clustering of search results has been shown to be advantageous over the simple list presentation of search results. However, in most clustering interfaces, the clusters are not ada...
Xuehua Shen, ChengXiang Zhai, Nicholas J. Belkin
BMCBI
2006
86views more  BMCBI 2006»
14 years 9 months ago
PHY*FI: fast and easy online creation and manipulation of phylogeny color figures
nd: The need to depict a phylogeny, or some other kind of abstract tree, is very frequently experienced by researchers from a broad range of biological and computational disciplin...
Jakob Fredslund