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» Inferring Genetic Networks from Microarray Data
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BMCBI
2004
208views more  BMCBI 2004»
14 years 11 months ago
Hybrid clustering for microarray image analysis combining intensity and shape features
Background: Image analysis is the first crucial step to obtain reliable results from microarray experiments. First, areas in the image belonging to single spots have to be identif...
Jörg Rahnenführer, Daniel Bozinov
KDD
2009
ACM
179views Data Mining» more  KDD 2009»
15 years 6 months ago
Identifying graphs from noisy and incomplete data
There is a growing wealth of data describing networks of various types, including social networks, physical networks such as transportation or communication networks, and biologic...
Galileo Mark S. Namata Jr., Lise Getoor
93
Voted
RECOMB
2002
Springer
16 years 2 days ago
A bayesian approach to transcript estimation from gene array data: the BEAM technique
We present a new statistically optimal approach to estimate transcript levels and ratios from one or more gene array experiments. The Bayesian Estimation of Array Measurements (BE...
Ron O. Dror, Jonathan G. Murnick, Nicola A. Rinald...
BMCBI
2010
148views more  BMCBI 2010»
14 years 12 months ago
Applying unmixing to gene expression data for tumor phylogeny inference
Background: While in principle a seemingly infinite variety of combinations of mutations could result in tumor development, in practice it appears that most human cancers fall int...
Russell Schwartz, Stanley Shackney
JCB
2006
185views more  JCB 2006»
14 years 11 months ago
Bayesian Sequential Inference for Stochastic Kinetic Biochemical Network Models
As postgenomic biology becomes more predictive, the ability to infer rate parameters of genetic and biochemical networks will become increasingly important. In this paper, we expl...
Andrew Golightly, Darren J. Wilkinson