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» Integrative Analysis of Protein Interaction Data
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KDD
2005
ACM
104views Data Mining» more  KDD 2005»
15 years 10 months ago
Mining tree queries in a graph
We present an algorithm for mining tree-shaped patterns in a large graph. Novel about our class of patterns is that they can contain constants, and can contain existential nodes w...
Bart Goethals, Eveline Hoekx, Jan Van den Bussche
BMCBI
2007
173views more  BMCBI 2007»
14 years 9 months ago
Ringo - an R/Bioconductor package for analyzing ChIP-chip readouts
Background: Chromatin immunoprecipitation combined with DNA microarrays (ChIP-chip) is a high-throughput assay for DNA-protein-binding or post-translational chromatin/histone modi...
Joern Toedling, Oleg Sklyar, Tammo Krueger, Jenny ...
IJDMMM
2008
119views more  IJDMMM 2008»
14 years 9 months ago
A relational perspective on spatial data mining
: Remote sensing and mobile devices nowadays collect a huge amount of spatial data, which have to be analysed in order to discover interesting information about economic, social an...
Donato Malerba
BMCBI
2010
240views more  BMCBI 2010»
14 years 9 months ago
CircuitsDB: a database of mixed microRNA/transcription factor feed-forward regulatory circuits in human and mouse
Background: Transcription Factors (TFs) and microRNAs (miRNAs) are key players for gene expression regulation in higher eukaryotes. In the last years, a large amount of bioinforma...
Olivier Friard, Angela Re, Daniela Taverna, Michel...
BMCBI
2007
154views more  BMCBI 2007»
14 years 9 months ago
Inferring biological networks with output kernel trees
Background: Elucidating biological networks between proteins appears nowadays as one of the most important challenges in systems biology. Computational approaches to this problem ...
Pierre Geurts, Nizar Touleimat, Marie Dutreix, Flo...