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BMCBI
2008
138views more  BMCBI 2008»
15 years 4 months ago
M-BISON: Microarray-based integration of data sources using networks
Background: The accurate detection of differentially expressed (DE) genes has become a central task in microarray analysis. Unfortunately, the noise level and experimental variabi...
Bernie J. Daigle Jr., Russ B. Altman
140
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BMCBI
2010
84views more  BMCBI 2010»
15 years 4 months ago
An integrated analysis of molecular aberrations in NCI-60 cell lines
Background: Cancer is a complex disease where various types of molecular aberrations drive the development and progression of malignancies. Large-scale screenings of multiple type...
Chen-Hsiang Yeang
IEEEVAST
2010
14 years 10 months ago
DimStiller: Workflows for dimensional analysis and reduction
DimStiller is a system for dimensionality reduction and analysis. It frames the task of understanding and transforming input dimensions as a series of analysis steps where users t...
Stephen Ingram, Tamara Munzner, Veronika Irvine, M...
BMCBI
2010
179views more  BMCBI 2010»
14 years 11 months ago
Circadian signatures in rat liver: from gene expression to pathways
Background: Circadian rhythms are 24 hour oscillations in many behavioural, physiological, cellular and molecular processes that are controlled by an endogenous clock which is ent...
Meric A. Ovacik, Siddharth Sukumaran, Richard R. A...
143
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CSB
2005
IEEE
137views Bioinformatics» more  CSB 2005»
15 years 9 months ago
A Learned Comparative Expression Measure for Affymetrix GeneChip DNA Microarrays
Perhaps the most common question that a microarray study can ask is, “Between two given biological conditions, which genes exhibit changed expression levels?” Existing methods...
Will Sheffler, Eli Upfal, John Sedivy, William Sta...