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BMCBI
2010
132views more  BMCBI 2010»
14 years 9 months ago
Error margin analysis for feature gene extraction
Background: Feature gene extraction is a fundamental issue in microarray-based biomarker discovery. It is normally treated as an optimization problem of finding the best predictiv...
Chi Kin Chow, Hai Long Zhu, Jessica Lacy, Winston ...
94
Voted
CLEIEJ
2007
152views more  CLEIEJ 2007»
14 years 9 months ago
Gene Expression Analysis using Markov Chains extracted from RNNs
Abstract. This paper present a new approach for the analysis of gene expression, by extracting a Markov Chain from trained Recurrent Neural Networks (RNNs). A lot of microarray dat...
Igor Lorenzato Almeida, Denise Regina Pechmann Sim...
BMCBI
2010
91views more  BMCBI 2010»
14 years 8 months ago
Washing scaling of GeneChip microarray expression
Background: Post-hybridization washing is an essential part of microarray experiments. Both the quality of the experimental washing protocol and adequate consideration of washing ...
Hans Binder, Knut Krohn, Conrad J. Burden
CSB
2005
IEEE
137views Bioinformatics» more  CSB 2005»
15 years 3 months ago
A Learned Comparative Expression Measure for Affymetrix GeneChip DNA Microarrays
Perhaps the most common question that a microarray study can ask is, “Between two given biological conditions, which genes exhibit changed expression levels?” Existing methods...
Will Sheffler, Eli Upfal, John Sedivy, William Sta...
BIB
2007
59views more  BIB 2007»
14 years 9 months ago
Statistically designing microarrays and microarray experiments to enhance sensitivity and specificity
Gene expression signatures from microarray experiments promise to provide important prognostic tools for predicting disease outcome or response to treatment. A number of microarra...
Jason C. Hsu, Jane Chang, Tao Wang, Eiríkur...