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BMCBI
2008
116views more  BMCBI 2008»
15 years 3 months ago
IgTM: An algorithm to predict transmembrane domains and topology in proteins
Background: Due to their role of receptors or transporters, membrane proteins play a key role in many important biological functions. In our work we used Grammatical Inference (GI...
Piedachu Peris, Damián López, Marcel...
BMCBI
2008
158views more  BMCBI 2008»
15 years 3 months ago
Metrics for GO based protein semantic similarity: a systematic evaluation
Background: Several semantic similarity measures have been applied to gene products annotated with Gene Ontology terms, providing a basis for their functional comparison. However,...
Catia Pesquita, Daniel Faria, Hugo P. Bastos, Ant&...
CORR
2010
Springer
117views Education» more  CORR 2010»
15 years 3 months ago
Evolution with Drifting Targets
We consider the question of the stability of evolutionary algorithms to gradual changes, or drift, in the target concept. We define an algorithm to be resistant to drift if, for s...
Varun Kanade, Leslie G. Valiant, Jennifer Wortman ...
CORR
2008
Springer
127views Education» more  CORR 2008»
15 years 3 months ago
MAPEL: Achieving Global Optimality for a Non-convex Wireless Power Control Problem
Achieving weighted throughput maximization (WTM) through power control has been a long standing open problem in interference-limited wireless networks. The complicated coupling bet...
Liping Qian, Ying Jun Zhang, Jianwei Huang
ALMOB
2006
138views more  ALMOB 2006»
15 years 3 months ago
A combinatorial optimization approach for diverse motif finding applications
Background: Discovering approximately repeated patterns, or motifs, in biological sequences is an important and widely-studied problem in computational molecular biology. Most fre...
Elena Zaslavsky, Mona Singh