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» Linear complexity of transformed sequences
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SODA
2008
ACM
104views Algorithms» more  SODA 2008»
14 years 11 months ago
Fast and reliable reconstruction of phylogenetic trees with very short edges
Abstract Ilan Gronau Shlomo Moran Sagi Snir Phylogenetic reconstruction is the problem of reconstructing an evolutionary tree from sequences corresponding to leaves of that tree. ...
Ilan Gronau, Shlomo Moran, Sagi Snir
ALMOB
2006
138views more  ALMOB 2006»
14 years 9 months ago
A combinatorial optimization approach for diverse motif finding applications
Background: Discovering approximately repeated patterns, or motifs, in biological sequences is an important and widely-studied problem in computational molecular biology. Most fre...
Elena Zaslavsky, Mona Singh
GECCO
2007
Springer
209views Optimization» more  GECCO 2007»
15 years 3 months ago
Kernel based automatic clustering using modified particle swarm optimization algorithm
This paper introduces a method for clustering complex and linearly non-separable datasets, without any prior knowledge of the number of naturally occurring clusters. The proposed ...
Ajith Abraham, Swagatam Das, Amit Konar
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WSC
2000
14 years 11 months ago
Variance reduction techniques for value-at-risk with heavy-tailed risk factors
The calculation of value-at-risk (VAR) for large portfolios of complex instruments is among the most demanding and widespread computational challenges facing the financial industr...
Paul Glasserman, Philip Heidelberger, Perwez Shaha...
CORR
2007
Springer
124views Education» more  CORR 2007»
14 years 9 months ago
Graph-Based Decoding in the Presence of ISI
We propose a new graph representation for ISI channels that can be used for combined equalization and decoding by linear programming (LP) or iterative message-passing (IMP) decodi...
Mohammad H. Taghavi, Paul H. Siegel