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» Logic-Based Modeling in Systems Biology
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WSC
2008
15 years 2 months ago
An application of parallel Monte Carlo modeling for real-time disease surveillance
The global health, threatened by emerging infectious diseases, pandemic influenza, and biological warfare, is becoming increasingly dependent on the rapid acquisition, processing,...
David W. Bauer, Mojdeh Mohtashemi
CSB
2005
IEEE
103views Bioinformatics» more  CSB 2005»
15 years 5 months ago
ECOME: A simple model for an evolving consumption web
ECOME is an interactive, graph-based model for simulating an evolving, closed consumption web. It demonstrates the fundamental behavior of a global ecosystem over evolutionary tim...
Christopher Bystroff, Sam DeLuca, Carl N. McDaniel
BIOSYSTEMS
2007
115views more  BIOSYSTEMS 2007»
14 years 12 months ago
Evolving fuzzy rules to model gene expression
This paper develops an algorithm that extracts explanatory rules from microarray data, which we treat as time series, using genetic programming (GP) and fuzzy logic. Reverse polis...
Ricardo Linden, Amit Bhaya
ASM
2000
ASM
15 years 4 months ago
Report on a Practical Application of ASMs in Software Design
ASMs have been used at Siemens Corporate Technology to design a component in a software package called FALKO. Main purpose of FALKO is the construction and validation of timetables...
Egon Börger, Peter Päppinghaus, Joachim ...
IHI
2012
291views Healthcare» more  IHI 2012»
13 years 7 months ago
PANI: an interactive data-driven tool for target prioritization in signaling networks
Biological network analysis often aims at the target identification problem, which is to predict which molecule to inhibit (or activate) for a disease treatment to achieve optimu...
Huey-Eng Chua, Sourav S. Bhowmick, Lisa Tucker-Kel...