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» MINE: Module Identification in NEtworks
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BMCBI
2007
80views more  BMCBI 2007»
15 years 7 days ago
Mining expression-dependent modules in the human interaction network
ent> <title> <p>Highlights from the Third International Society for Computational Biology (ISCB) Student Council Symposium at the Fifteenth Annual International Conf...
Elisabeth Georgii, Sabine Dietmann, Takeaki Uno, P...
KDD
2008
ACM
121views Data Mining» more  KDD 2008»
16 years 25 days ago
Reconstructing chemical reaction networks: data mining meets system identification
We present an approach to reconstructing chemical reaction networks from time series measurements of the concentrations of the molecules involved. Our solution strategy combines t...
Yong Ju Cho, Naren Ramakrishnan, Yang Cao
104
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ICMLA
2004
15 years 1 months ago
Outlier detection and evaluation by network flow
Detecting outliers is an important topic in data mining. Sometimes the outliers are more interesting than the rest of the data. Outlier identification has lots of applications, su...
Ying Liu, Alan P. Sprague
BMCBI
2007
136views more  BMCBI 2007»
15 years 13 days ago
Prediction of tissue-specific cis-regulatory modules using Bayesian networks and regression trees
Background: In vertebrates, a large part of gene transcriptional regulation is operated by cisregulatory modules. These modules are believed to be regulating much of the tissue-sp...
Xiaoyu Chen, Mathieu Blanchette
BMCBI
2007
133views more  BMCBI 2007»
15 years 16 days ago
Semantic integration to identify overlapping functional modules in protein interaction networks
Background: The systematic analysis of protein-protein interactions can enable a better understanding of cellular organization, processes and functions. Functional modules can be ...
Young-Rae Cho, Woochang Hwang, Murali Ramanathan, ...