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» Mining Protein Sequences for Motifs
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108
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RECOMB
2001
Springer
16 years 2 months ago
Predicting the beta-helix fold from protein sequence data
A method is presented that uses b-strand interactions to predict the parallel right-handed b-helix super-secondary structural motif in protein sequences. A program called BetaWrap...
Phil Bradley, Lenore Cowen, Matthew Menke, Jonatha...
111
Voted
RECOMB
2004
Springer
16 years 2 months ago
Mining protein family specific residue packing patterns from protein structure graphs
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
Jun Huan, Wei Wang 0010, Deepak Bandyopadhyay, Jac...
117
Voted
BIOCOMP
2006
15 years 3 months ago
Insight of the Signal Motif of GPI-(like)-anchored Proteins by using SVM
- Many proteins contain a signal sequence at their COOH-terminus recognized by glycosylphosphatidylinositol (GPI) anchor and attached on the membrane. Experimental result suggests ...
Wei Cao, Kazuya Sumikoshi, Tohru Terada, Shugo Nak...
111
Voted
KDD
2001
ACM
152views Data Mining» more  KDD 2001»
16 years 2 months ago
A scalable algorithm for clustering protein sequences
Valerie Guralnik, George Karypis
123
Voted
ALMOB
2006
102views more  ALMOB 2006»
15 years 1 months ago
Mining, compressing and classifying with extensible motifs
Background: Motif patterns of maximal saturation emerged originally in contexts of pattern discovery in biomolecular sequences and have recently proven a valuable notion also in t...
Alberto Apostolico, Matteo Comin, Laxmi Parida