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» Modelling Gene Regulatory Networks
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ALMOB
2006
113views more  ALMOB 2006»
14 years 10 months ago
Inverse bifurcation analysis: application to simple gene systems
Background: Bifurcation analysis has proven to be a powerful method for understanding the qualitative behavior of gene regulatory networks. In addition to the more traditional for...
James Lu, Heinz W. Engl, Peter Schuster
PKDD
2004
Springer
113views Data Mining» more  PKDD 2004»
15 years 3 months ago
Discovery of Regulatory Connections in Microarray Data
Abstract. In this paper, we introduce a new approach for mining regulatory interactions between genes in microarray time series studies. A number of preprocessing steps transform t...
Michael Egmont-Petersen, Wim de Jonge, Arno Siebes
BMCBI
2008
114views more  BMCBI 2008»
14 years 10 months ago
The pairwise disconnectivity index as a new metric for the topological analysis of regulatory networks
Background: Currently, there is a gap between purely theoretical studies of the topology of large bioregulatory networks and the practical traditions and interests of experimental...
Anatolij Potapov, Björn Goemann, Edgar Wingen...
BMCBI
2006
110views more  BMCBI 2006»
14 years 10 months ago
Modelling the network of cell cycle transcription factors in the yeast Saccharomyces cerevisiae
Background: Reverse-engineering regulatory networks is one of the central challenges for computational biology. Many techniques have been developed to accomplish this by utilizing...
Shawn Cokus, Sherri Rose, David Haynor, Niels Gr&o...
RECOMB
2004
Springer
15 years 10 months ago
Modeling and Analysis of Heterogeneous Regulation in Biological Networks
Abstract. In this study we propose a novel model for the representation of biological networks and provide algorithms for learning model parameters from experimental data. Our appr...
Irit Gat-Viks, Amos Tanay, Ron Shamir