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CIBB
2009
14 years 10 months ago
On the Use of Temporal Formal Logic to Model Gene Regulatory Networks
Modelling activities in molecular biology face the difficulty of prediction to link molecular knowledge with cell phenotypes. Even when the interaction graph between molecules is k...
Gilles Bernot, Jean-Paul Comet
JPDC
2006
175views more  JPDC 2006»
14 years 9 months ago
Stochastic modeling and analysis of hybrid mobility in reconfigurable distributed virtual machines
Virtualization provides a vehicle to manage the available resources and enhance their utilization in network computing. System dynamics requires virtual machines be distributed an...
Song Fu, Cheng-Zhong Xu
JSSPP
2004
Springer
15 years 3 months ago
Reconfigurable Gang Scheduling Algorithm
 Using a single traditional gang scheduling algorithm cannot provide the best performance for all workloads and parallel architectures. A solution for this problem is the use of...
Luís Fabrício Wanderley Góes,...
BMCBI
2007
109views more  BMCBI 2007»
14 years 9 months ago
TABASCO: A single molecule, base-pair resolved gene expression simulator
Background: Experimental studies of gene expression have identified some of the individual molecular components and elementary reactions that comprise and control cellular behavio...
Sriram Kosuri, Jason R. Kelly, Drew Endy
79
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IPPS
2008
IEEE
15 years 4 months ago
Overcoming scaling challenges in biomolecular simulations across multiple platforms
NAMD† is a portable parallel application for biomolecular simulations. NAMD pioneered the use of hybrid spatial and force decomposition, a technique now used by most scalable pr...
Abhinav Bhatele, Sameer Kumar, Chao Mei, James C. ...