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BMCBI
2006
139views more  BMCBI 2006»
14 years 10 months ago
Integrated functional visualization of eukaryotic genomes
Background: Increasing amounts of data from large scale whole genome analysis efforts demands convenient tools for manipulation, visualization and investigation. Whole genome plot...
Rohit Ghai, Hannes Lindemann, Trinad Chakraborty
BMCBI
2006
127views more  BMCBI 2006»
14 years 10 months ago
A graph-search framework for associating gene identifiers with documents
Background: One step in the model organism database curation process is to find, for each article, the identifier of every gene discussed in the article. We consider a relaxation ...
William W. Cohen, Einat Minkov
DEBU
2007
111views more  DEBU 2007»
14 years 10 months ago
Multi-lingual Semantic Matching with OrdPath in Relational Systems
The volume of information in natural languages in electronic format is increasing exponentially. The demographics of users of information management systems are becoming increasin...
A. Kumaran, Peter Carlin
NAR
2008
138views more  NAR 2008»
14 years 10 months ago
TarO: a target optimisation system for structural biology
TarO (http://www.compbio.dundee.ac.uk/taro) offers a single point of reference for key bioinformatics analyses relevant to selecting proteins or domains for study by structural bi...
Ian M. Overton, C. A. Johannes van Niekerk, Lester...
BMCBI
2005
163views more  BMCBI 2005»
14 years 10 months ago
Alkahest NuclearBLAST: a user-friendly BLAST management and analysis system
Background -: Sequencing of EST and BAC end datasets is no longer limited to large research groups. Drops in per-base pricing have made high throughput sequencing accessible to in...
Stephen E. Diener, Thomas D. Houfek, Sam E. Kalat,...