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» Multiple Sequence Alignment Using Reconfigurable Computing
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BMCBI
2008
131views more  BMCBI 2008»
14 years 10 months ago
CoCoNUT: an efficient system for the comparison and analysis of genomes
Background: Comparative genomics is the analysis and comparison of genomes from different species. This area of research is driven by the large number of sequenced genomes and hea...
Mohamed Ibrahim Abouelhoda, Stefan Kurtz, Enno Ohl...
RECOMB
2007
Springer
15 years 10 months ago
Pairwise Global Alignment of Protein Interaction Networks by Matching Neighborhood Topology
We describe an algorithm, IsoRank, for global alignment of two protein-protein interaction (PPI) networks. IsoRank aims to maximize the overall match between the two networks; in c...
Rohit Singh, Jinbo Xu, Bonnie Berger
IPPS
2007
IEEE
15 years 4 months ago
Radiation Hardened Coarse-Grain Reconfigurable Architecture for Space Applications
Technology trends are such that single event effects (SEE)are likely to become even more of a concern for the future. Decreasing feature sizes, lower operating voltage, and higher...
Sajid Baloch, Tughrul Arslan, Adrian Stoica
WABI
2009
Springer
132views Bioinformatics» more  WABI 2009»
15 years 4 months ago
mpscan: Fast Localisation of Multiple Reads in Genomes
Abstract. With Next Generation Sequencers, sequence based transcriptomic or epigenomic assays yield millions of short sequence reads that need to be mapped back on a reference geno...
Eric Rivals, Leena Salmela, Petteri Kiiskinen, Pet...
ICCV
1995
IEEE
15 years 1 months ago
Recovering 3D Motion of Multiple Objects Using Adaptive Hough Transform
—We present a method to determine 3D motion and structure of multiple objects from two perspective views, using adaptive Hough transform. In our method, segmentation is determine...
Tina Yu Tian, Mubarak Shah