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GECCO
2009
Springer
15 years 9 months ago
Multiobjectivization for parameter estimation: a case-study on the segment polarity network of drosophila
Mathematical modeling for gene regulative networks (GRNs) provides an effective tool for hypothesis testing in biology. A necessary step in setting up such models is the estimati...
Tim Hohm, Eckart Zitzler
166
Voted
BMCBI
2011
14 years 6 months ago
Improving pan-genome annotation using whole genome multiple alignment
Background: Rapid annotation and comparisons of genomes from multiple isolates (pan-genomes) is becoming commonplace due to advances in sequencing technology. Genome annotations c...
Samuel V. Angiuoli, Julie C. Dunning Hotopp, Steve...
124
Voted
SODA
1998
ACM
113views Algorithms» more  SODA 1998»
15 years 3 months ago
Fast Hierarchical Clustering and Other Applications of Dynamic Closest Pairs
We develop data structures for dynamic closest pair problems with arbitrary (not necessarily geometric) distance functions, based on a technique previously used by the author for ...
David Eppstein
123
Voted
IWPC
2000
IEEE
15 years 7 months ago
A Pattern Matching Framework for Software Architecture Recovery and Restructuring
This paper presents a framework for software architecture recovery and restructuring. The user specifies a high level abstraction view of the system using a structured pattern la...
Kamran Sartipi, Kostas Kontogiannis, Farhad Mavadd...
143
Voted
EGICE
2006
15 years 6 months ago
Evolutionary Generation of Implicative Fuzzy Rules for Design Knowledge Representation
Abstract. In knowledge representation by fuzzy rule based systems two reasoning mechanisms can be distinguished: conjunction-based and implication-based inference. Both approaches ...
Mark Freischlad, Martina Schnellenbach-Held, Torbe...