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WABI
2010
Springer
167views Bioinformatics» more  WABI 2010»
15 years 5 months ago
Quantifying the Strength of Natural Selection of a Motif Sequence
Quantification of selective pressures on regulatory sequences is a central question in studying the evolution of gene regulatory networks. Previous methods focus primarily on sing...
Chen-Hsiang Yeang
ICDE
2010
IEEE
178views Database» more  ICDE 2010»
15 years 5 months ago
The Hybrid-Layer Index: A synergic approach to answering top-k queries in arbitrary subspaces
In this paper, we propose the Hybrid-Layer Index (simply, the HL-index) that is designed to answer top-k queries efficiently when the queries are expressed on any arbitrary subset ...
Jun-Seok Heo, Junghoo Cho, Kyu-Young Whang
IPPS
2010
IEEE
15 years 5 months ago
KRASH: Reproducible CPU load generation on many-core machines
Abstract--In this article we present KRASH, a tool for reproducible generation of system-level CPU load. This tool is intended for use in shared memory machines equipped with multi...
Swann Perarnau, Guillaume Huard
PRIB
2010
Springer
176views Bioinformatics» more  PRIB 2010»
15 years 5 months ago
An On/Off Lattice Approach to Protein Structure Prediction from Contact Maps
Abstract. An important unsolved problem in structural bioinformatics is that of protein structure prediction (PSP), the reconstruction of a biologically plausible three-dimensional...
Stefano Teso, Cristina Di Risio, Andrea Passerini,...
BMCBI
2010
155views more  BMCBI 2010»
15 years 4 months ago
BrEPS: a flexible and automatic protocol to compute enzyme-specific sequence profiles for functional annotation
Background: Models for the simulation of metabolic networks require the accurate prediction of enzyme function. Based on a genomic sequence, enzymatic functions of gene products a...
Constantin Bannert, A. Welfle, C. aus dem Spring, ...
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