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IPPS
2007
IEEE
16 years 13 days ago
Speedup using Flowpaths for a Finite Difference Solution of a 3D Parabolic PDE
Partial differential equations (PDEs) are used to model physical phenomena and then appropriate convergent numerical algorithms are employed to solve them and create computer simu...
Darrin M. Hanna, Anna M. Spagnuolo, Michael DuChen...
ASPLOS
2009
ACM
15 years 10 months ago
Accelerating phase unwrapping and affine transformations for optical quadrature microscopy using CUDA
Optical Quadrature Microscopy (OQM) is a process which uses phase data to capture information about the sample being studied. OQM is part of an imaging framework developed by the ...
Perhaad Mistry, Sherman Braganza, David R. Kaeli, ...
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BMCBI
2010
142views more  BMCBI 2010»
15 years 6 months ago
Discover Protein Complexes in Protein-Protein Interaction Networks Using Parametric Local Modularity
Background: Recent advances in proteomic technologies have enabled us to create detailed protein-protein interaction maps in multiple species and in both normal and diseased cells...
Jongkwang Kim, Kai Tan
BMCBI
2007
144views more  BMCBI 2007»
15 years 6 months ago
Robust regression for periodicity detection in non-uniformly sampled time-course gene expression data
Background: In practice many biological time series measurements, including gene microarrays, are conducted at time points that seem to be interesting in the biologist's opin...
Miika Ahdesmäki, Harri Lähdesmäki, ...
BIOINFORMATICS
2006
118views more  BIOINFORMATICS 2006»
15 years 6 months ago
A probabilistic dynamical model for quantitative inference of the regulatory mechanism of transcription
Motivation Quantitative estimation of the regulatory relationship between transcription factors and genes is a fundamental stepping stone when trying to develop models of cellular...
Guido Sanguinetti, Magnus Rattray, Neil D. Lawrenc...