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» On Compressibility of Protein Sequences
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98
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ET
2002
111views more  ET 2002»
15 years 10 days ago
Two-Dimensional Test Data Compression for Scan-Based Deterministic BIST
In this paper a novel architecture for scan-based mixed mode BIST is presented. To reduce the storage requirements for the deterministic patterns it relies on a two-dimensional co...
Huaguo Liang, Sybille Hellebrand, Hans-Joachim Wun...
96
Voted
BMCBI
2010
111views more  BMCBI 2010»
15 years 20 days ago
Protein sequences classification by means of feature extraction with substitution matrices
Background: This paper deals with the preprocessing of protein sequences for supervised classification. Motif extraction is one way to address that task. It has been largely used ...
Rabie Saidi, Mondher Maddouri, Engelbert Mephu Ngu...
97
Voted
BMCBI
2006
127views more  BMCBI 2006»
15 years 18 days ago
Automatic discovery of cross-family sequence features associated with protein function
Background: Methods for predicting protein function directly from amino acid sequences are useful tools in the study of uncharacterised protein families and in comparative genomic...
Markus Brameier, Josien Haan, Andrea Krings, Rober...
114
Voted
BMCBI
2005
115views more  BMCBI 2005»
15 years 13 days ago
Statistical distributions of optimal global alignment scores of random protein sequences
Background: The inference of homology from statistically significant sequence similarity is a central issue in sequence alignments. So far the statistical distribution function un...
Hongxia Pang, Jiaowei Tang, Su-Shing Chen, Shiheng...
111
Voted
JPDC
2007
167views more  JPDC 2007»
15 years 13 days ago
On the design of high-performance algorithms for aligning multiple protein sequences on mesh-based multiprocessor architectures
In this paper, we address the problem of multiple sequence alignment (MSA) for handling very large number of proteins sequences on mesh-based multiprocessor architectures. As the ...
Diana H. P. Low, Bharadwaj Veeravalli, David A. Ba...