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» On numbers of Davenport-Schinzel sequences
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TCBB
2008
93views more  TCBB 2008»
14 years 11 months ago
2SNP: Scalable Phasing Method for Trios and Unrelated Individuals
Emerging microarray technologies allow affordable typing of very long genome sequences. A key challenge in analyzing of such huge amount of data is scalable and accurate computatio...
Dumitru Brinza, Alexander Zelikovsky
ARSCOM
2005
64views more  ARSCOM 2005»
14 years 11 months ago
Hamilton Paths in Certain Arithmetic Graphs
For each integer m 1, consider the graph Gm whose vertex set is the set N = {0, 1, 2, . . . } of natural numbers and whose edges are the pairs xy with y = x + m or y = x - m or y...
Paul A. Russell
BMCBI
2005
110views more  BMCBI 2005»
14 years 11 months ago
Discovery of protein-protein interactions using a combination of linguistic, statistical and graphical information
Background: The rapid publication of important research in the biomedical literature makes it increasingly difficult for researchers to keep current with significant work in their...
James W. Cooper, Aaron Kershenbaum
BMCBI
2005
102views more  BMCBI 2005»
14 years 11 months ago
Genome-wide identification of the regulatory targets of a transcription factor using biochemical characterization and computatio
Background: A major challenge in computational genomics is the development of methodologies that allow accurate genome-wide prediction of the regulatory targets of a transcription...
Emmitt R. Jolly, Chen-Shan Chin, Ira Herskowitz, H...
BMCBI
2005
114views more  BMCBI 2005»
14 years 11 months ago
A new decoding algorithm for hidden Markov models improves the prediction of the topology of all-beta membrane proteins
Background: Structure prediction of membrane proteins is still a challenging computational problem. Hidden Markov models (HMM) have been successfully applied to the problem of pre...
Piero Fariselli, Pier Luigi Martelli, Rita Casadio