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» On the Multiple Gene Duplication Problem
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INFOCOM
2000
IEEE
15 years 4 months ago
Layered Multicast Recovery
We study the problem of localizing repair packets when packets are lost. When repair packets are multicasted, a highly lossy receiver may swamp the entire multicast “group” wi...
Injong Rhee, Srinath R. Joshi, Minsuk Lee, S. Muth...
BMCBI
2007
153views more  BMCBI 2007»
14 years 11 months ago
A new pairwise kernel for biological network inference with support vector machines
Background: Much recent work in bioinformatics has focused on the inference of various types of biological networks, representing gene regulation, metabolic processes, protein-pro...
Jean-Philippe Vert, Jian Qiu, William Stafford Nob...
KDD
2004
ACM
126views Data Mining» more  KDD 2004»
16 years 2 days ago
Turning CARTwheels: an alternating algorithm for mining redescriptions
We present an unusual algorithm involving classification trees-CARTwheels--where two trees are grown in opposite directions so that they are joined at their leaves. This approach ...
Naren Ramakrishnan, Deept Kumar, Bud Mishra, Malco...
108
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GCB
2000
Springer
137views Biometrics» more  GCB 2000»
15 years 3 months ago
Detecting Sporadic Recombination in DNA Alignments with Hidden Markov Models
Conventional phylogenetic tree estimation methods assume that all sites in a DNA multiple alignment have the same evolutionary history. This assumption is violated in data sets fro...
Dirk Husmeier, Frank Wright
KDD
2003
ACM
161views Data Mining» more  KDD 2003»
16 years 2 days ago
Empirical Bayesian data mining for discovering patterns in post-marketing drug safety
Because of practical limits in characterizing the safety profiles of therapeutic products prior to marketing, manufacturers and regulatory agencies perform post-marketing surveill...
David M. Fram, June S. Almenoff, William DuMouchel