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BMCBI
2008
136views more  BMCBI 2008»
14 years 11 months ago
An efficient method for the prediction of deleterious multiple-point mutations in the secondary structure of RNAs using suboptim
Background: RNAmute is an interactive Java application which, given an RNA sequence, calculates the secondary structure of all single point mutations and organizes them into categ...
Alexander Churkin, Danny Barash
CORR
2007
Springer
105views Education» more  CORR 2007»
14 years 11 months ago
Relative-Error CUR Matrix Decompositions
Many data analysis applications deal with large matrices and involve approximating the matrix using a small number of “components.” Typically, these components are linear combi...
Petros Drineas, Michael W. Mahoney, S. Muthukrishn...
MCSS
2007
Springer
14 years 11 months ago
Lyapunov functions for time-varying systems satisfying generalized conditions of Matrosov theorem
The classical Matrosov theorem concludes uniform asymptotic stability of time varying systems via a weak Lyapunov function (positive definite, decrescent, with negative semidefi...
Frédéric Mazenc, Dragan Nesic
BMCBI
2010
183views more  BMCBI 2010»
14 years 9 months ago
The complexity of gene expression dynamics revealed by permutation entropy
Background: High complexity is considered a hallmark of living systems. Here we investigate the complexity of temporal gene expression patterns using the concept of Permutation En...
Xiaoliang Sun, Yong Zou, Victoria J. Nikiforova, J...
TKDE
2012
270views Formal Methods» more  TKDE 2012»
13 years 1 months ago
Low-Rank Kernel Matrix Factorization for Large-Scale Evolutionary Clustering
—Traditional clustering techniques are inapplicable to problems where the relationships between data points evolve over time. Not only is it important for the clustering algorith...
Lijun Wang, Manjeet Rege, Ming Dong, Yongsheng Din...