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» Ontology based Approach in Knowledge Sharing Measurement
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BMCBI
2008
135views more  BMCBI 2008»
15 years 2 months ago
Knowledge-guided multi-scale independent component analysis for biomarker identification
Background: Many statistical methods have been proposed to identify disease biomarkers from gene expression profiles. However, from gene expression profile data alone, statistical...
Li Chen, Jianhua Xuan, Chen Wang, Ie-Ming Shih, Yu...
BMCBI
2008
122views more  BMCBI 2008»
15 years 2 months ago
Reconstructing networks of pathways via significance analysis of their intersections
Background: Significance analysis at single gene level may suffer from the limited number of samples and experimental noise that can severely limit the power of the chosen statist...
Mirko Francesconi, Daniel Remondini, Nicola Nerett...
BMCBI
2007
207views more  BMCBI 2007»
15 years 1 months ago
Analyzing in situ gene expression in the mouse brain with image registration, feature extraction and block clustering
Background: Many important high throughput projects use in situ hybridization and may require the analysis of images of spatial cross sections of organisms taken with cellular lev...
Manjunatha Jagalur, Chris Pal, Erik G. Learned-Mil...
RR
2010
Springer
15 years 9 days ago
Processing RIF and OWL2RL within DLVHEX
We present an extension of the DLVHEX system to support RIF-Core, a dialect of W3C’s Rule Interchange Format (RIF), as well as combinations of RIF-Core and OWL2RL ontologies. DLV...
Marco Marano, Philipp Obermeier, Axel Polleres
RECOMB
2005
Springer
16 years 2 months ago
The Factor Graph Network Model for Biological Systems
Abstract. We introduce an extended computational framework for studying biological systems. Our approach combines formalization of existing qualitative models that are in wide but ...
Irit Gat-Viks, Amos Tanay, Daniela Raijman, Ron Sh...