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112
Voted
BMCBI
2005
117views more  BMCBI 2005»
15 years 12 days ago
An SVM-based system for predicting protein subnuclear localizations
Background: The large gap between the number of protein sequences in databases and the number of functionally characterized proteins calls for the development of a fast computatio...
Zhengdeng Lei, Yang Dai
BMCBI
2005
125views more  BMCBI 2005»
15 years 12 days ago
Query3d: a new method for high-throughput analysis of functional residues in protein structures
Background: The identification of local similarities between two protein structures can provide clues of a common function. Many different methods exist for searching for similar ...
Gabriele Ausiello, Allegra Via, Manuela Helmer-Cit...
136
Voted
BMCBI
2002
109views more  BMCBI 2002»
15 years 10 days ago
Kangaroo - A pattern-matching program for biological sequences
Background: Biologists are often interested in performing a simple database search to identify proteins or genes that contain a well-defined sequence pattern. Many databases do no...
Doron Betel, Christopher W. V. Hogue
PVLDB
2008
113views more  PVLDB 2008»
14 years 11 months ago
Rewriting procedures for batched bindings
Queries, or calls to stored procedures/user-defined functions are often invoked multiple times, either from within a loop in an application program, or from the where/select claus...
Ravindra Guravannavar, S. Sudarshan
SDM
2010
SIAM
202views Data Mining» more  SDM 2010»
14 years 11 months ago
Multiresolution Motif Discovery in Time Series
Time series motif discovery is an important problem with applications in a variety of areas that range from telecommunications to medicine. Several algorithms have been proposed t...
Nuno Castro, Paulo J. Azevedo