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131
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BIOINFORMATICS
2012
13 years 5 months ago
SSuMMo: rapid analysis, comparison and visualization of microbial communities
Motivation: Next-generation sequencing methods are generating increasingly massive datasets, yet still do not fully capture genetic diversity in the richest environments. To under...
Alex L. B. Leach, James P. J. Chong, Kelly R. Rede...
124
Voted
GG
2010
Springer
15 years 4 months ago
Multi-Amalgamation in Adhesive Categories
Abstract. Amalgamation is a well-known concept for graph transformations in order to model synchronized parallelism of rules with shared subrules and corresponding transformations....
Ulrike Golas, Hartmut Ehrig, Annegret Habel
132
Voted
IPPS
2010
IEEE
15 years 1 months ago
Head-body partitioned string matching for Deep Packet Inspection with scalable and attack-resilient performance
Abstract--Dictionary-based string matching (DBSM) is a critical component of Deep Packet Inspection (DPI), where thousands of malicious patterns are matched against high-bandwidth ...
Yi-Hua E. Yang, Viktor K. Prasanna, Chenqian Jiang
SC
1995
ACM
15 years 7 months ago
Multicast Virtual Topologies for Collective Communication in MPCs and ATM Clusters
This paper de nes and describes the properties of a multicast virtual topology, the M-array, and a resource-ecient variation, the REM-array. It is shown how several collective op...
Yih Huang, Chengchang Huang, Philip K. McKinley
ISPAN
2000
IEEE
15 years 8 months ago
Versatile Processor Design for Efficiency and High Performance
We present new architectural concepts for uniprocessor designs that conform to the data-driven computation paradigm. Usage of our D2 -CPU (Data-Driven processor) follows the natura...
Sotirios G. Ziavras