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» Parallelization of Modular Algorithms
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135
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DAC
2009
ACM
15 years 11 months ago
PiCAP: a parallel and incremental capacitance extraction considering stochastic process variation
It is unknown how to include stochastic process variation into fast-multipole-method (FMM) for a full chip capacitance extraction. This paper presents a parallel FMM extraction us...
Fang Gong, Hao Yu, Lei He
IPPS
2009
IEEE
15 years 11 months ago
Parallel reconstruction of neighbor-joining trees for large multiple sequence alignments using CUDA
Computing large multiple protein sequence alignments using progressive alignment tools such as ClustalW requires several hours on state-of-the-art workstations. ClustalW uses a th...
Yongchao Liu, Bertil Schmidt, Douglas L. Maskell
ICPPW
2008
IEEE
15 years 11 months ago
Replay-Based Synchronization of Timestamps in Event Traces of Massively Parallel Applications
Event traces are helpful in understanding the performance behavior of message-passing applications since they allow in-depth analyses of communication and synchronization patterns...
Daniel Becker, John C. Linford, Rolf Rabenseifner,...
IPPS
2007
IEEE
15 years 11 months ago
Coarse-grain Parallel Execution for 2-dimensional PDE Problems
This paper presents a new approach for the execution of coarse-grain (tiled) parallel SPMD code for applications derived from the explicit discretization of 2-dimensional PDE prob...
Georgios I. Goumas, Nikolaos Drosinos, Vasileios K...
127
Voted
CIKM
2007
Springer
15 years 11 months ago
Parallel linkage
We study the parallelization of the (record) linkage problem – i.e., to identify matching records between two collections of records, A and B. One of main idiosyncrasies of the ...
Hung-sik Kim, Dongwon Lee