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» Path following algorithm for the graph matching problem
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123
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GCB
2004
Springer
92views Biometrics» more  GCB 2004»
15 years 9 months ago
Syntenic Layout of Two Assemblies of Related Genomes
: To facilitate research in comparative genomics, sequencing projects are increasingly aimed at assembling the genomes of closely related organisms. Given two incomplete assemblies...
Olaf Delgado Friedrichs, Aaron L. Halpern, Ross Li...
SODA
2008
ACM
123views Algorithms» more  SODA 2008»
15 years 5 months ago
Delaunay graphs of point sets in the plane with respect to axis-parallel rectangles
Given a point set P in the plane, the Delaunay graph with respect to axis-parallel rectangles is a graph defined on the vertex set P, whose two points p, q P are connected by an ...
Xiaomin Chen, János Pach, Mario Szegedy, G&...
BIOINFORMATICS
2008
172views more  BIOINFORMATICS 2008»
15 years 4 months ago
Fitting a geometric graph to a protein-protein interaction network
Motivation: Finding a good network null model for protein-protein interaction (PPI) networks is a fundamental issue. Such a model would provide insights into the interplay between...
Desmond J. Higham, Marija Rasajski, Natasa Przulj
128
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ISAAC
1995
Springer
97views Algorithms» more  ISAAC 1995»
15 years 7 months ago
A Linear Time Algorithm For Finding Maximal Planar Subgraphs
Given an undirected graph G, the maximal planar subgraph problem is to determine a planar subgraph H of G such that no edge of G-H can be added to H without destroying planarity. P...
Wen-Lian Hsu
FOCS
2008
IEEE
15 years 10 months ago
Submodular Approximation: Sampling-based Algorithms and Lower Bounds
We introduce several generalizations of classical computer science problems obtained by replacing simpler objective functions with general submodular functions. The new problems i...
Zoya Svitkina, Lisa Fleischer