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BMCBI
2008
130views more  BMCBI 2008»
14 years 9 months ago
IDEA: Interactive Display for Evolutionary Analyses
Background: The availability of complete genomic sequences for hundreds of organisms promises to make obtaining genome-wide estimates of substitution rates, selective constraints ...
Amy Egan, Anup Mahurkar, Jonathan Crabtree, Jonath...
BMCBI
2008
154views more  BMCBI 2008»
14 years 9 months ago
GenomeMatcher: A graphical user interface for DNA sequence comparison
Background: The number of available genome sequences is increasing, and easy-to-use software that enables efficient comparative analysis is needed. Results: We developed GenomeMat...
Yoshiyuki Ohtsubo, Wakako Ikeda-Ohtsubo, Yuji Naga...
CORR
2008
Springer
116views Education» more  CORR 2008»
14 years 9 months ago
Binding bigraphs as symmetric monoidal closed theories
Milner's bigraphs [1] are a general framework for reasoning about distributed and concurrent programming languages. Notably, it has been designed to encompass both the -calcul...
Tom Hirschowitz, Aurélien Pardon
ALGORITHMICA
2006
86views more  ALGORITHMICA 2006»
14 years 9 months ago
Slabpose Columnsort: A New Oblivious Algorithm for Out-of-Core Sorting on Distributed-Memory Clusters
Our goal is to develop a robust out-of-core sorting program for a distributed-memory cluster. The literature contains two dominant paradigms for out-of-core sorting algorithms: me...
Geeta Chaudhry, Thomas H. Cormen
JIB
2008
76views more  JIB 2008»
14 years 9 months ago
WebStruct and VisualStruct: web interfaces and visualization for Structure software implemented in a cluster environment
Structure, is a widely used software tool to investigate population genetic structure with multi-locus genotyping data. The software uses an iterative algorithm to group individua...
B. Jayashree, S. Rajgopal, David A. Hoisington, V....