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» Performance Analysis of Three Text-Join Algorithms
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BMCBI
2010
135views more  BMCBI 2010»
14 years 9 months ago
Efficient genome-scale phylogenetic analysis under the duplication-loss and deep coalescence cost models
Background: Genomic data provide a wealth of new information for phylogenetic analysis. Yet making use of this data requires phylogenetic methods that can efficiently analyze extr...
Mukul S. Bansal, J. Gordon Burleigh, Oliver Eulens...
BMCBI
2007
149views more  BMCBI 2007»
14 years 9 months ago
A unified framework for finding differentially expressed genes from microarray experiments
Background: This paper presents a unified framework for finding differentially expressed genes (DEGs) from the microarray data. The proposed framework has three interrelated modul...
Jahangheer S. Shaik, Mohammed Yeasin
TVLSI
2008
108views more  TVLSI 2008»
14 years 9 months ago
Unified Convolutional/Turbo Decoder Design Using Tile-Based Timing Analysis of VA/MAP Kernel
To satisfy the advanced forward-error-correction (FEC) standards, in which the Convolutional code and Turbo code may co-exit, a prototype design of a unified Convolutional/Turbo de...
Fan-Min Li, Cheng-Hung Lin, An-Yeu Wu
CC
2011
Springer
270views System Software» more  CC 2011»
14 years 1 months ago
Subregion Analysis and Bounds Check Elimination for High Level Arrays
For decades, the design and implementation of arrays in programming languages has reflected a natural tension between productivity and performance. Recently introduced HPCS langua...
Mackale Joyner, Zoran Budimlic, Vivek Sarkar
PPOPP
2006
ACM
15 years 3 months ago
On-line automated performance diagnosis on thousands of processes
Performance analysis tools are critical for the effective use of large parallel computing resources, but existing tools have failed to address three problems that limit their scal...
Philip C. Roth, Barton P. Miller