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2000
ACM
15 years 7 months ago
Scalable Molecular Dynamics for Large Biomolecular Systems
We present an optimized parallelization scheme for molecular dynamics simulations of large biomolecular systems, implemented in the production-quality molecular dynamics program N...
Robert Brunner, James C. Phillips, Laxmikant V. Ka...
AIPS
2010
15 years 5 months ago
When Policies Can Be Trusted: Analyzing a Criteria to Identify Optimal Policies in MDPs with Unknown Model Parameters
Computing a good policy in stochastic uncertain environments with unknown dynamics and reward model parameters is a challenging task. In a number of domains, ranging from space ro...
Emma Brunskill
ISCAPDCS
2001
15 years 4 months ago
Optimal Broadcasting in Injured Hypercubes Using Directed Safety Levels
Reliable communication in injured hypercubes with faulty links/nodes using directed safety levels is studied in this paper. In this approach, each node u in an n-dimensional hyper...
Jie Wu
144
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BIBE
2007
IEEE
138views Bioinformatics» more  BIBE 2007»
15 years 9 months ago
A Flexible Stem-Based Local Search Algorithm for Predicting RNA Secondary Structures Including Pseudoknots
-We demonstrate a new algorithm named FlexStem to predict RNA secondary structures with pseudoknots. Our approach is based on the free energy minimization criterion, and utilizes a...
Xiang Chen, Simin He, Dongbo Bu, Runsheng Chen, We...
LCN
2003
IEEE
15 years 8 months ago
Evaluating System Performance in Gigabit Networks
- With the current wide deployment of Gigabit Ethernet technology in the backbone and workgroup switches, the network performance bottleneck has shifted for the first time in nearl...
Khaled Salah, K. El-Badawi