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» Performance Prediction of a Parallel Simulator
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136
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BMCBI
2008
155views more  BMCBI 2008»
15 years 3 months ago
Prediction of regulatory elements in mammalian genomes using chromatin signatures
Background: Recent genomic scale survey of epigenetic states in the mammalian genomes has shown that promoters and enhancers are correlated with distinct chromatin signatures, pro...
Kyoung-Jae Won, Iouri Chepelev, Bing Ren, Wei Wang
161
Voted
BMCBI
2010
110views more  BMCBI 2010»
15 years 2 months ago
Improvements to previous algorithms to predict gene structure and isoform concentrations using Affymetrix Exon arrays
Background: Exon arrays provide a way to measure the expression of different isoforms of genes in an organism. Most of the procedures to deal with these arrays are focused on gene...
Miguel A. Anton, Ander Aramburu, Angel Rubio
PPOPP
2006
ACM
15 years 9 months ago
Minimizing execution time in MPI programs on an energy-constrained, power-scalable cluster
Recently, the high-performance computing community has realized that power is a performance-limiting factor. One reason for this is that supercomputing centers have limited power ...
Robert Springer, David K. Lowenthal, Barry Rountre...
ATAL
2010
Springer
15 years 4 months ago
Closing the learning-planning loop with predictive state representations
A central problem in artificial intelligence is to choose actions to maximize reward in a partially observable, uncertain environment. To do so, we must learn an accurate model of ...
Byron Boots, Sajid M. Siddiqi, Geoffrey J. Gordon
138
Voted
BMCBI
2008
138views more  BMCBI 2008»
15 years 3 months ago
Using neural networks and evolutionary information in decoy discrimination for protein tertiary structure prediction
Background: We present a novel method of protein fold decoy discrimination using machine learning, more specifically using neural networks. Here, decoy discrimination is represent...
Ching-Wai Tan, David T. Jones