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» Phylogenetic Comparative Assembly
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GECCO
2005
Springer
150views Optimization» more  GECCO 2005»
15 years 2 months ago
A GA for maximum likelihood phylogenetic inference using neighbour-joining as a genotype to phenotype mapping
Evolutionary relationships among species can be represented by a phylogenetic tree and inferred by optimising some measure of fitness, such as the statistical likelihood of the t...
Leon Poladian
CHI
2003
ACM
15 years 2 months ago
Comparative effectiveness of augmented reality in object assembly
Although there has been much speculation about the potential of Augmented Reality (AR), there are very few empirical studies about its effectiveness. This paper describes an exper...
Arthur Tang, Charles B. Owen, Frank Biocca, Weimin...
82
Voted
BMCBI
2010
133views more  BMCBI 2010»
14 years 9 months ago
Improving de novo sequence assembly using machine learning and comparative genomics for overlap correction
Background: With the rapid expansion of DNA sequencing databases, it is now feasible to identify relevant information from prior sequencing projects and completed genomes and appl...
Lance E. Palmer, Mathäus Dejori, Randall A. B...
85
Voted
GCB
2010
Springer
182views Biometrics» more  GCB 2010»
14 years 7 months ago
Repeat-aware Comparative Genome Assembly
: The current high-throughput sequencing technologies produce gigabytes of data even when prokaryotic genomes are processed. In a subsequent assembly phase, the generated overlappi...
Peter Husemann, Jens Stoye
BMCBI
2006
161views more  BMCBI 2006»
14 years 9 months ago
A novel approach to phylogenetic tree construction using stochastic optimization and clustering
Background: The problem of inferring the evolutionary history and constructing the phylogenetic tree with high performance has become one of the major problems in computational bi...
Ling Qin, Yixin Chen, Yi Pan, Ling Chen