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» Points-To Analysis for Java using Annotated Constraints
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BMCBI
2005
147views more  BMCBI 2005»
14 years 9 months ago
GATA: a graphic alignment tool for comparative sequence analysis
Background: Several problems exist with current methods used to align DNA sequences for comparative sequence analysis. Most dynamic programming algorithms assume that conserved se...
David A. Nix, Michael B. Eisen
66
Voted
OOPSLA
2005
Springer
15 years 3 months ago
Refactoring support for class library migration
As object-oriented class libraries evolve, classes are occasionally deprecated in favor of others with roughly the same functionality. In Java’s standard libraries, for example,...
Ittai Balaban, Frank Tip, Robert M. Fuhrer
BMCBI
2008
178views more  BMCBI 2008»
14 years 9 months ago
Identification of coherent patterns in gene expression data using an efficient biclustering algorithm and parallel coordinate vi
Background: The DNA microarray technology allows the measurement of expression levels of thousands of genes under tens/hundreds of different conditions. In microarray data, genes ...
Kin-On Cheng, Ngai-Fong Law, Wan-Chi Siu, Alan Wee...
CC
2011
Springer
270views System Software» more  CC 2011»
14 years 1 months ago
Subregion Analysis and Bounds Check Elimination for High Level Arrays
For decades, the design and implementation of arrays in programming languages has reflected a natural tension between productivity and performance. Recently introduced HPCS langua...
Mackale Joyner, Zoran Budimlic, Vivek Sarkar
106
Voted
TOG
2012
273views Communications» more  TOG 2012»
12 years 12 months ago
Functional maps: a flexible representation of maps between shapes
We present a novel representation of maps between pairs of shapes that allows for efficient inference and manipulation. Key to our approach is a generalization of the notion of m...
Maks Ovsjanikov, Mirela Ben-Chen, Justin Solomon, ...