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ASE
2002
160views more  ASE 2002»
14 years 11 months ago
Proving Invariants of I/O Automata with TAME
This paper describes a specialized interface to PVS called TAME (Timed Automata Modeling Environment) which provides automated support for proving properties of I/O automata. A maj...
Myla Archer, Constance L. Heitmeyer, Elvinia Ricco...
BMCBI
2004
154views more  BMCBI 2004»
14 years 11 months ago
Base-By-Base: Single nucleotide-level analysis of whole viral genome alignments
Background: With ever increasing numbers of closely related virus genomes being sequenced, it has become desirable to be able to compare two genomes at a level more detailed than ...
Ryan Brodie, Alex J. Smith, Rachel L. Roper, Vasil...
BMCBI
2004
120views more  BMCBI 2004»
14 years 11 months ago
pdb-care (PDB CArbohydrate REsidue check): a program to support annotation of complex carbohydrate structures in PDB files
Background: Carbohydrates are involved in a variety of fundamental biological processes and pathological situations. They therefore have a large pharmaceutical and diagnostic pote...
Thomas Lütteke, Claus-Wilhelm von der Lieth
BMCBI
2004
156views more  BMCBI 2004»
14 years 11 months ago
DIALIGN P: Fast pair-wise and multiple sequence alignment using parallel processors
Background: Parallel computing is frequently used to speed up computationally expensive tasks in Bioinformatics. Results: Herein, a parallel version of the multi-alignment program...
Martin Schmollinger, Kay Nieselt, Michael Kaufmann...
BMCBI
2004
139views more  BMCBI 2004»
14 years 11 months ago
Resolution of large and small differences in gene expression using models for the Bayesian analysis of gene expression levels an
Background: The detection of small yet statistically significant differences in gene expression in spotted DNA microarray studies is an ongoing challenge. Meeting this challenge r...
Jeffrey P. Townsend
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