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BIOINFORMATICS
2005
110views more  BIOINFORMATICS 2005»
14 years 10 months ago
Classification of oligonucleotide fingerprints: application for microbial community and gene expression analyses
Oligonucleotide fingerprinting is an array-based approach used for analysis of microbial community composition and gene expression profiling. Oligonucleotide fingerprinting of rib...
Katechan Jampachaisri, Lea Valinsky, James Bornema...
CSB
2005
IEEE
126views Bioinformatics» more  CSB 2005»
15 years 3 months ago
Visualization of Logic Analysis of Phylogenetic Profiles (LAPP)
Recently Bowers et al. [1] analyzed triplet logic relationships among 4873 Clusters of Orthologous Groups (COGS) from 67 fully sequenced organisms by calculating how well logic re...
Kay A. Robbins, Li Zhao
89
Voted
BMCBI
2006
153views more  BMCBI 2006»
14 years 10 months ago
Cancer diagnosis marker extraction for soft tissue sarcomas based on gene expression profiling data by using projective adaptive
Background: Recent advances in genome technologies have provided an excellent opportunity to determine the complete biological characteristics of neoplastic tissues, resulting in ...
Hiro Takahashi, Takeshi Nemoto, Teruhiko Yoshida, ...
82
Voted
BMCBI
2005
127views more  BMCBI 2005»
14 years 10 months ago
Dynamic modeling of cis-regulatory circuits and gene expression prediction via cross-gene identification
Background: Gene expression programs depend on recognition of cis elements in promoter region of target genes by transcription factors (TFs), but how TFs regulate gene expression ...
Li-Hsieh Lin, Hsiao-Ching Lee, Wen-Hsiung Li, Bor-...
91
Voted
BMCBI
2004
139views more  BMCBI 2004»
14 years 10 months ago
Resolution of large and small differences in gene expression using models for the Bayesian analysis of gene expression levels an
Background: The detection of small yet statistically significant differences in gene expression in spotted DNA microarray studies is an ongoing challenge. Meeting this challenge r...
Jeffrey P. Townsend