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BMCBI
2006
137views more  BMCBI 2006»
15 years 1 months ago
Sigma: multiple alignment of weakly-conserved non-coding DNA sequence
Background: Existing tools for multiple-sequence alignment focus on aligning protein sequence or protein-coding DNA sequence, and are often based on extensions to Needleman-Wunsch...
Rahul Siddharthan
BMCBI
2006
129views more  BMCBI 2006»
15 years 1 months ago
Identifying genes that contribute most to good classification in microarrays
Background: The goal of most microarray studies is either the identification of genes that are most differentially expressed or the creation of a good classification rule. The dis...
Stuart G. Baker, Barnett S. Kramer
BMCBI
2007
174views more  BMCBI 2007»
15 years 1 months ago
ESTuber db: an online database for Tuber borchii EST sequences
Background: The ESTuber database (http://www.itb.cnr.it/estuber) includes 3,271 Tuber borchii expressed sequence tags (EST). The dataset consists of 2,389 sequences from an in-hou...
Barbara Lazzari, Andrea Caprera, Cristian Cosentin...
BMCBI
2007
153views more  BMCBI 2007»
15 years 1 months ago
A new pairwise kernel for biological network inference with support vector machines
Background: Much recent work in bioinformatics has focused on the inference of various types of biological networks, representing gene regulation, metabolic processes, protein-pro...
Jean-Philippe Vert, Jian Qiu, William Stafford Nob...
JDFP
2006
139views more  JDFP 2006»
15 years 1 months ago
Discovering Hidden Evidence
Over the past decade, the advancement of a myriad of methods, techniques and technologies to conceal digital evidence and covertly communicate have increased at an alarming rate. I...
Chet Hosmer