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» Properties and computations of matrix pseudospectra
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BMCBI
2010
141views more  BMCBI 2010»
14 years 10 months ago
Computing and visually analyzing mutual information in molecular co-evolution
Background: Selective pressure in molecular evolution leads to uneven distributions of amino acids and nucleotides. In fact one observes correlations among such constituents due t...
Sebastian Bremm, Tobias Schreck, Patrick Boba, Ste...
PPSC
1993
14 years 11 months ago
A Matrix Framework for Conjugate Gradient Methods and Some Variants of CG with Less Synchronization Overhead
We will present a matrix framework for the conjugate gradient methods, which is expressed in terms of whole vector sequences instead of single vectors or initial parts of sequence...
Eduardo F. D'Azevedo, Victor Eijkhout, Charles H. ...
JCC
2007
82views more  JCC 2007»
14 years 9 months ago
Peptide reagent design based on physical and chemical properties of amino acid residues
: It has tremendous values for both drug discovery and basic research to develop a solid bioinformatical tool for guiding peptide reagent design. Based on the physical and chemical...
Qishi Du, Ri-Bo Huang, Yu-Tuo Wei, Cheng-Hua Wang,...
KDD
2009
ACM
188views Data Mining» more  KDD 2009»
15 years 10 months ago
Mining discrete patterns via binary matrix factorization
Mining discrete patterns in binary data is important for subsampling, compression, and clustering. We consider rankone binary matrix approximations that identify the dominant patt...
Bao-Hong Shen, Shuiwang Ji, Jieping Ye
JPDC
2008
135views more  JPDC 2008»
14 years 10 months ago
Parallel block tridiagonalization of real symmetric matrices
Two parallel block tridiagonalization algorithms and implementations for dense real symmetric matrices are presented. Block tridiagonalization is a critical pre-processing step for...
Yihua Bai, Robert C. Ward